Python 2.7 Invalid syntax when running script from .csv file using pandas -
i running script python 2.7 using pandas read 2 csv files. keep getting "invalid syntax" error messages, particularly on line 6 , 8. can't figure out problem, since line 6 identical line 5 , there don't error. !
import numpy np import csv csv import pandas pd da = pd.read_csv('snp_rs.csv', index_col=(0,1), usecols=(0, 1), header=none, converters = dict.fromkeys([0,1]) db = pd.read_csv('chl.map.csv', index_col=(0,1), usecols=(0,1), header=none, converters = dict.fromkeys([0,1]) result = da.join(db, how='inner') x = result.to_csv('snp_rs_out.csv', header=none) # write csv print x
as commented need close parentheses around read_csv
call:
da = pd.read_csv('snp_rs.csv', index_col=(0,1), usecols=(0, 1), header=none, converters = dict.fromkeys([0,1])
it's missing closing paren.
i find lot easier write/read these if split lines:
da = pd.read_csv('snp_rs.csv', index_col=(0,1), usecols=(0, 1), header=none, converters=dict.fromkeys([0,1])
then it's clearer final )
missing.
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